Bra029889 (DREB2B, DREB2)

Aliases : DREB2B, DREB2

Description : subgroup ERF-IV/DREB2 transcription factor

Gene families : OG0001468 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001468_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra029889
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_8

Target	Alias	Description	ECC score	Gene Family Method	Actions
Bra028759	DREB2, DREB2A	subgroup ERF-IV/DREB2 transcription factor	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0002376	immune system process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004506	squalene monooxygenase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005319	lipid transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006869	lipid transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006955	immune response	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009607	response to biotic stimulus	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009690	cytokinin metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0010817	regulation of hormone levels	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0022834	ligand-gated channel activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0030246	carbohydrate binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0036094	small molecule binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042445	hormone metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0043168	anion binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043207	response to external biotic stimulus	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0043565	sequence-specific DNA binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0045087	innate immune response	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051707	response to other organism	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0061024	membrane organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0065008	regulation of biological quality	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0071949	FAD binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0098542	defense response to other organism	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0120009	intermembrane lipid transfer	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0120013	lipid transfer activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:1901265	nucleoside phosphate binding	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	80	129

External Links

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Bra029889 (DREB2B, DREB2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation