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  5. Bra028935

Bra028935 (ATCRT1, BTL04)


Aliases : ATCRT1, BTL04

Description : RING-H2-class BTL-subclass E3 ubiquitin ligase


Gene families : OG0007362 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra028935
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_142


Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000271 polysaccharide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003924 GTPase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009250 glucan biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016759 cellulose synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030243 cellulose metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030244 cellulose biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035251 UDP-glucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042887 amide transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044042 glucan metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051273 beta-glucan metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051274 beta-glucan biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:1904680 peptide transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001841 Znf_RING 426 468
IPR039525 RNF126-like_zinc-ribbon 198 229
IPR006566 FBD 119 164
No external refs found!