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  5. Bra002872

Bra002872


Description : not classified


Gene families : OG0022775 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra002872
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_211


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003779 actin binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005488 binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005839 proteasome core complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0018208 peptidyl-proline modification IEP Brassica rapa GO terms from Neighborhoods
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0034062 5'-3' RNA polymerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044183 protein folding chaperone IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097747 RNA polymerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140662 ATP-dependent protein folding chaperone IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 543 574
IPR002885 Pentatricopeptide_rpt 924 955
IPR002885 Pentatricopeptide_rpt 995 1021
IPR002885 Pentatricopeptide_rpt 853 885
IPR002885 Pentatricopeptide_rpt 333 364
IPR002885 Pentatricopeptide_rpt 508 539
IPR002885 Pentatricopeptide_rpt 968 994
IPR002885 Pentatricopeptide_rpt 166 193
IPR002885 Pentatricopeptide_rpt 722 770
IPR002885 Pentatricopeptide_rpt 652 700
IPR002885 Pentatricopeptide_rpt 1033 1078
IPR002885 Pentatricopeptide_rpt 444 490
IPR002885 Pentatricopeptide_rpt 371 420
IPR002885 Pentatricopeptide_rpt 266 315
IPR002885 Pentatricopeptide_rpt 787 835
IPR002885 Pentatricopeptide_rpt 196 244
IPR002885 Pentatricopeptide_rpt 581 630
No external refs found!