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  5. Bra002823

Bra002823 (ATCRT1, BTL04)


Aliases : ATCRT1, BTL04

Description : RING-H2-class BTL-subclass E3 ubiquitin ligase


Gene families : OG0007362 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra002823
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_70


Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016830 carbon-carbon lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016832 aldehyde-lyase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030880 RNA polymerase complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0050661 NADP binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051287 NAD binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Brassica rapa GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1990234 transferase complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 8 39
IPR001841 Znf_RING 233 277
No external refs found!