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  5. Bra027986

Bra027986 (emb2207, RP1, ARP1, RPL3A)


Aliases : emb2207, RP1, ARP1, RPL3A

Description : component *(uL3) of large ribosomal-subunit (LSU) proteome


Gene families : OG0004616 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004616_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra027986
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Bra035298 emb2207, RP1, ARP1, RPL3A component *(uL3) of large ribosomal-subunit (LSU) proteome 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004620 phospholipase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004629 phospholipase C activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004827 proline-tRNA ligase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006418 tRNA aminoacylation for protein translation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006433 prolyl-tRNA aminoacylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008081 phosphoric diester hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016298 lipase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043038 amino acid activation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043039 tRNA aminoacylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140101 catalytic activity, acting on a tRNA IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000597 Ribosomal_uL3 1 220
IPR000597 Ribosomal_uL3 222 334
No external refs found!