Aliases : PUB15
Description : E3 ubiquitin ligase *(PUB15)
Gene families : OG0028383 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa (Bra) PCC: Bra027977 | |
Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_703 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
MF | GO:0005515 | protein binding | IEA | Interproscan |
BP | GO:0016567 | protein ubiquitination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004519 | endonuclease activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004521 | RNA endonuclease activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004540 | RNA nuclease activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004784 | superoxide dismutase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006801 | superoxide metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0009451 | RNA modification | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0009521 | photosystem | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0009523 | photosystem II | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0015979 | photosynthesis | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0016070 | RNA metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016891 | RNA endonuclease activity, producing 5'-phosphomonoesters | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0034357 | photosynthetic membrane | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0042254 | ribosome biogenesis | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0042651 | thylakoid membrane | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0043038 | amino acid activation | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0043039 | tRNA aminoacylation | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0043167 | ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0043169 | cation binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0044085 | cellular component biogenesis | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0046872 | metal ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:1990204 | oxidoreductase complex | IEP | Brassica rapa GO terms from Neighborhoods |
No external refs found! |