Heatmap: Cluster_703 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra003624 (PSBR)
0.43 0.05 -0.43 0.36 -0.62 0.51 0.69 0.52 0.29 0.43 -0.06 0.8 -0.28 1.09 -0.57 0.76 0.31 -0.56 0.6 -0.15 0.94 1.02 -4.19 -1.83 -1.88 -2.06 -1.94 -1.58 -1.14 -1.64 -1.46
Bra027977 (PUB15)
-0.93 -2.08 -1.53 -3.44 -1.06 0.84 0.74 0.46 1.1 0.36 0.57 0.25 0.32 1.16 0.67 1.24 0.99 -1.17 0.77 0.17 1.47 0.21 -5.19 -1.52 -3.54 -3.23 -2.73 -2.59 -2.17 -2.36 -1.08

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.