Bra027878 (HO4)


Aliases : HO4

Description : alpha-helical heme oxygenase *(HO)


Gene families : OG0001605 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001605_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra027878
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_24


Type GO Term Name Evidence Source
MF GO:0004392 heme oxygenase (decyclizing) activity IEA Interproscan
BP GO:0006788 heme oxidation IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0001510 RNA methylation IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005811 lipid droplet IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008170 N-methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008173 RNA methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008649 rRNA methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0012511 monolayer-surrounded lipid storage body IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031167 rRNA methylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070475 rRNA base methylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140102 catalytic activity, acting on a rRNA IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR016053 Haem_Oase-like 114 282
No external refs found!