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  5. Bra026749

Bra026749 (MED15_1, NRB4, AtMed15a)


Aliases : MED15_1, NRB4, AtMed15a

Description : component *(MED15) of tail module of MEDIATOR transcription co-activator complex


Gene families : OG0000761 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000761_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra026749
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Bra016651 MED15_1, NRB4, AtMed15a component *(MED15) of tail module of MEDIATOR... 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008483 transaminase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030170 pyridoxal phosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051276 chromosome organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0070279 vitamin B6 binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036546 MED15_KIX 20 99
No external refs found!