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  5. Bra026640

Bra026640 (EMB2107, MSA, RPN5A)


Aliases : EMB2107, MSA, RPN5A

Description : regulatory component *(RPN5) of 26S proteasome


Gene families : OG0002016 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002016_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra026640
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_181

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_7_53021.1 EMB2107, MSA, RPN5A regulatory component *(RPN5) of 26S proteasome 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004559 alpha-mannosidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005839 proteasome core complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006644 phospholipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008654 phospholipid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015923 mannosidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Brassica rapa GO terms from Neighborhoods
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031090 organelle membrane IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Brassica rapa GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!