- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : AtPP2-B1, PP2-B1, AFA1
Description : not classified
Gene families : OG0002053 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002053_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra026609 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_278 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005575 | cellular_component | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009250 | glucan biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0016020 | membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016758 | hexosyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0030001 | metal ion transport | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044042 | glucan metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0046527 | glucosyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0098797 | plasma membrane protein complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0110165 | cellular anatomical entity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1990234 | transferase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR025886 | PP2-like | 122 | 326 |
| No external refs found! |