Bra026445

Description : not classified

Gene families : OG0014071 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra026445
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_243

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003997	acyl-CoA oxidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004602	glutathione peroxidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005777	peroxisome	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006098	pentose-phosphate shunt	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006635	fatty acid beta-oxidation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006721	terpenoid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006739	NADP metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006740	NADPH regeneration	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009062	fatty acid catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016042	lipid catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016054	organic acid catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016114	terpenoid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016744	transketolase or transaldolase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019395	fatty acid oxidation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0030258	lipid modification	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034440	lipid oxidation	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0042579	microbody	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0042887	amide transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044242	cellular lipid catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044255	cellular lipid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044282	small molecule catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046395	carboxylic acid catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:1904680	peptide transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR006027	NusB_RsmB_TIM44	178	275

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Bra026445

Expression Profile

Co-expression Networks

Functional Annotation