Bra026006 (AtSPS2, SPS2)

Aliases : AtSPS2, SPS2

Description : solanesyl diphosphate synthase *(SPS1/2). EC_2.5 transferase transferring alkyl or aryl group, other than methyl group

Gene families : OG0007504 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra026006
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_269

Type	GO Term	Name	Evidence	Source
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	IEA	Interproscan
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004222	metalloendopeptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004497	monooxygenase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005506	iron ion binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006090	pyruvate metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006353	DNA-templated transcription termination	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008270	zinc ion binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008654	phospholipid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0009975	cyclase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0009976	tocopherol cyclase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016491	oxidoreductase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016726	oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0020037	heme binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0043167	ion binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0043169	cation binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046490	isopentenyl diphosphate metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0046872	metal ion binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0046906	tetrapyrrole binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0046914	transition metal ion binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0050992	dimethylallyl diphosphate biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0050993	dimethylallyl diphosphate metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0051745	4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000092	Polyprenyl_synt	130	375

External Links

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Bra026006 (AtSPS2, SPS2)

Expression Profile

Co-expression Networks

Functional Annotation