Bra025975 (TAF12B, EER4, CKH1)

Aliases : TAF12B, EER4, CKH1

Description : component *(TAF12) of SAGA transcription co-activator complex

Gene families : OG0012802 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra025975

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005667	transcription regulator complex	None	Extended
CC	GO:0005669	transcription factor TFIID complex	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006352	DNA-templated transcription initiation	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0090575	RNA polymerase II transcription regulator complex	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004222	metalloendopeptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006904	vesicle docking involved in exocytosis	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008237	metallopeptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0022406	membrane docking	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0048278	vesicle docking	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051640	organelle localization	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0099023	vesicle tethering complex	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0110165	cellular anatomical entity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0140029	exocytic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0140056	organelle localization by membrane tethering	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140110	transcription regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140657	ATP-dependent activity	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003228	TFIID_TAF12_dom	493	560

External Links

No external refs found!

Bra025975 (TAF12B, EER4, CKH1)

Expression Profile

Co-expression Networks

Functional Annotation