Bra025920

Description : EC_1.1 oxidoreductase acting on CH-OH group of donor

Gene families : OG0024000 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra025920
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_117

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016832	aldehyde-lyase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0050661	NADP binding	IEA	Interproscan
MF	GO:0051287	NAD binding	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000776	kinetochore	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004057	arginyl-tRNA--protein transferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005337	nucleoside transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006413	translational initiation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006633	fatty acid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006643	membrane lipid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006665	sphingolipid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006672	ceramide metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015858	nucleoside transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015931	nucleobase-containing compound transport	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016598	protein arginylation	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016746	acyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016755	aminoacyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034508	centromere complex assembly	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044255	cellular lipid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051276	chromosome organization	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0061630	ubiquitin protein ligase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0065004	protein-DNA complex assembly	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0071824	protein-DNA complex organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0099080	supramolecular complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901264	carbohydrate derivative transport	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901642	nucleoside transmembrane transport	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR031475	NBD_C	884	1050
IPR000771	FBA_II	1064	1339
IPR010737	4-carb_acid_sugar_kinase_N	619	859
IPR006115	6PGDH_NADP-bd	2	126
IPR006115	6PGDH_NADP-bd	287	445
IPR029154	HIBADH-like_NADP-bd	133	249
IPR029154	HIBADH-like_NADP-bd	452	572

External Links

No external refs found!

Bra025920

Expression Profile

Co-expression Networks

Functional Annotation