Bra025125

Description : accessory protein *(COQ4)

Gene families : OG0011835 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra025125
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_660

Type	GO Term	Name	Evidence	Source
BP	GO:0006743	ubiquinone metabolic process	None	Extended
BP	GO:0006744	ubiquinone biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0042180	cellular ketone metabolic process	None	Extended
BP	GO:0042181	ketone biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901661	quinone metabolic process	None	Extended
BP	GO:1901663	quinone biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006886	intracellular protein transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008104	protein localization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009451	RNA modification	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0009982	pseudouridine synthase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015031	protein transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016192	vesicle-mediated transport	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016853	isomerase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016866	intramolecular transferase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0030117	membrane coat	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0030118	clathrin coat	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0030120	vesicle coat	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0030125	clathrin vesicle coat	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0030132	clathrin coat of coated pit	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0033036	macromolecule localization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0045184	establishment of protein localization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046483	heterocycle metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046907	intracellular transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051649	establishment of localization in cell	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0070727	cellular macromolecule localization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0090304	nucleic acid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0098797	plasma membrane protein complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR007715	Coq4	7	222

External Links

No external refs found!

Bra025125

Expression Profile

Co-expression Networks

Functional Annotation