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Aliases : RDP, RDP1
Description : pre-60S ribosomal-subunit proteome nuclear export factor *(MRT4)
Gene families : OG0003159 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003159_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra024770 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_151 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000120 | RNA polymerase I transcription regulator complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003674 | molecular_function | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003824 | catalytic activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004486 | methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004519 | endonuclease activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004797 | thymidine kinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005525 | GTP binding | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005575 | cellular_component | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005634 | nucleus | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005667 | transcription regulator complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006351 | DNA-templated transcription | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006360 | transcription by RNA polymerase I | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006364 | rRNA processing | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006400 | tRNA modification | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008033 | tRNA processing | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008233 | peptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009058 | biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009451 | RNA modification | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016072 | rRNA metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016579 | protein deubiquitination | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016787 | hydrolase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0019136 | deoxynucleoside kinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0019206 | nucleoside kinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0019899 | enzyme binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0031267 | small GTPase binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0034470 | ncRNA processing | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042254 | ribosome biogenesis | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0043226 | organelle | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0043229 | intracellular organelle | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043687 | post-translational protein modification | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044085 | cellular component biogenesis | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044238 | primary metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0051020 | GTPase binding | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071704 | organic substance metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0090730 | Las1 complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0097747 | RNA polymerase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0101005 | deubiquitinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1902555 | endoribonuclease complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1902911 | protein kinase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1905348 | endonuclease complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1905354 | exoribonuclease complex | IEP | Brassica rapa GO terms from Neighborhoods |
| No external refs found! |