Bra002468 (ISPG, CSB3, HDS, GCPE, CLB4)


Aliases : ISPG, CSB3, HDS, GCPE, CLB4

Description : 4-hydroxy-3-methylbut-2-enyl diphosphate synthase


Gene families : OG0023226 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra002468
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_22


Type GO Term Name Evidence Source
BP GO:0016114 terpenoid biosynthetic process IEA Interproscan
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030247 polysaccharide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043565 sequence-specific DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051213 dioxygenase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140110 transcription regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:2001070 starch binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004588 IspG_bac-typ 40 681
No external refs found!