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  5. Bra024697

Bra024697


Description : REM-type transcription factor


Gene families : OG0004728 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004728_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra024697
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_15


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004126 cytidine deaminase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004650 polygalacturonase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006216 cytidine catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008417 fucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009116 nucleoside metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009119 ribonucleoside metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009164 nucleoside catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009415 response to water IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009628 response to abiotic stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009972 cytidine deamination IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010035 response to inorganic substance IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019239 deaminase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042454 ribonucleoside catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042546 cell wall biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044282 small molecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046087 cytidine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051920 peroxiredoxin activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071554 cell wall organization or biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901657 glycosyl compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901658 glycosyl compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901700 response to oxygen-containing compound IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902074 response to salt IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 167 258
IPR003340 B3_DNA-bd 444 541
IPR003340 B3_DNA-bd 287 370
No external refs found!