Bra024627 (AP1G2, Gamma-ADR,...)

Aliases : AP1G2, Gamma-ADR, GAMMA-ADAPTIN 1

Description : large subunit gamma of AP-1 trans-Golgi network cargo adaptor complex

Gene families : OG0000229 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000229_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra024627
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_155

Target	Alias	Description	ECC score	Gene Family Method	Actions
Spov3_chr4.04171	AP1G1	large subunit gamma of AP-1 trans-Golgi network cargo...	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008037	cell recognition	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0016020	membrane	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0017119	Golgi transport complex	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0030120	vesicle coat	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0030126	COPI vesicle coat	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0048193	Golgi vesicle transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0048544	recognition of pollen	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0099023	vesicle tethering complex	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002553	Clathrin/coatomer_adapt-like_N	27	579
IPR008152	Clathrin_a/b/g-adaptin_app_Ig	757	869

External Links

No external refs found!