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  5. Bra024005

Bra024005 (beta1-COP)


Aliases : beta1-COP

Description : subunit beta of cargo adaptor F-subcomplex


Gene families : OG0003241 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003241_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra024005
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_206


Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
CC GO:0030126 COPI vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Brassica rapa GO terms from Neighborhoods
CC GO:0000159 protein phosphatase type 2A complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006897 endocytosis IEP Brassica rapa GO terms from Neighborhoods
CC GO:0008287 protein serine/threonine phosphatase complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015931 nucleobase-containing compound transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016020 membrane IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019208 phosphatase regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019888 protein phosphatase regulator activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031090 organelle membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Brassica rapa GO terms from Neighborhoods
BP GO:0098657 import into cell IEP Brassica rapa GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901264 carbohydrate derivative transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:1903293 phosphatase complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011710 Coatomer_bsu_C 669 807
IPR029446 COPB1_appendage_platform_dom 813 940
IPR002553 Clathrin/coatomer_adapt-like_N 19 466
No external refs found!