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  5. Bra023968

Bra023968 (HSI2-L1, HSL1, VAL2)


Aliases : HSI2-L1, HSL1, VAL2

Description : LAV-VAL-type transcription factor. regulatory protein *(VAL) of PRC1 complex


Gene families : OG0027752 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra023968
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_211


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005047 signal recognition particle binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005785 signal recognition particle receptor complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006605 protein targeting IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006612 protein targeting to membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006613 cotranslational protein targeting to membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006810 transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006811 monoatomic ion transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006812 monoatomic cation transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016887 ATP hydrolysis activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Brassica rapa GO terms from Neighborhoods
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033365 protein localization to organelle IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043021 ribonucleoprotein complex binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045047 protein targeting to ER IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051179 localization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051213 dioxygenase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051668 localization within membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070972 protein localization to endoplasmic reticulum IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072594 establishment of protein localization to organelle IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072657 protein localization to membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090150 establishment of protein localization to membrane IEP Brassica rapa GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011124 Znf_CW 517 559
IPR003340 B3_DNA-bd 283 382
No external refs found!