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  5. Bra000238

Bra000238 (VLN2, ATVLN2)


Aliases : VLN2, ATVLN2

Description : villin actin-crosslinking factor


Gene families : OG0004064 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra000238
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_141


Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
BP GO:0007010 cytoskeleton organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006629 lipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006644 phospholipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008654 phospholipid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0018024 obsolete histone lysine N-methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030118 clathrin coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030125 clathrin vesicle coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030132 clathrin coat of coated pit IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044877 protein-containing complex binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050789 regulation of biological process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0065007 biological regulation IEP Brassica rapa GO terms from Neighborhoods
CC GO:0098797 plasma membrane protein complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 124 190
IPR007123 Gelsolin-like_dom 29 96
IPR007123 Gelsolin-like_dom 239 311
IPR007123 Gelsolin-like_dom 381 458
IPR007123 Gelsolin-like_dom 611 686
IPR003128 Villin_headpiece 910 945
No external refs found!