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  5. Bra023685

Bra023685 (Obg A-2, CPSAR1,...)


Aliases : Obg A-2, CPSAR1, ATOBGL, OBGL, OBGC, EMB3138, EMB269, ATOBGC

Description : regulatory GTPase (OBGL) of thylakoid biogenesis


Gene families : OG0022507 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra023685
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_187


Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003747 translation release factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006415 translational termination IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006418 tRNA aminoacylation for protein translation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006520 amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006605 protein targeting IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006720 isoprenoid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006721 terpenoid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008079 translation termination factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008299 isoprenoid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0009507 chloroplast IEP Brassica rapa GO terms from Neighborhoods
CC GO:0009536 plastid IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016114 terpenoid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016485 protein processing IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016744 transketolase or transaldolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022411 cellular component disassembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032984 protein-containing complex disassembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043038 amino acid activation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043039 tRNA aminoacylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051604 protein maturation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071586 CAAX-box protein processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140101 catalytic activity, acting on a tRNA IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:2001070 starch binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006073 GTP-bd 376 496
IPR006169 GTP1_OBG_dom 208 373
IPR015349 OCT_dom 581 650
No external refs found!