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  5. Bra023541

Bra023541 (BBX2, ATCOL1, COL1)


Aliases : BBX2, ATCOL1, COL1

Description : BBX class-I transcription factor. floral promoter *(CONSTANS)


Gene families : OG0011633 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra023541
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_19


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030599 pectinesterase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042545 cell wall modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0052689 carboxylic ester hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071554 cell wall organization or biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071555 cell wall organization IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000315 Znf_B-box 52 97
IPR010402 CCT_domain 246 288
No external refs found!