Bra023520 (UGD3)

Aliases : UGD3

Description : EC_1.1 oxidoreductase acting on CH-OH group of donor. UDP-D-glucose 6-dehydrogenase

Gene families : OG0000920 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000920_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra023520
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_175

Target	Alias	Description	ECC score	Gene Family Method	Actions
Bra028430	UDG4	EC_1.1 oxidoreductase acting on CH-OH group of donor....	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0051287	NAD binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003849	3-deoxy-7-phosphoheptulonate synthase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0005975	carbohydrate metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0007010	cytoskeleton organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009072	aromatic amino acid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016307	obsolete phosphatidylinositol phosphate kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016787	hydrolase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0070569	uridylyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR014027	UDP-Glc/GDP-Man_DH_C	328	451
IPR001732	UDP-Glc/GDP-Man_DH_N	3	186
IPR014026	UDP-Glc/GDP-Man_DH_dimer	210	304

External Links

No external refs found!