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  5. Bra023518

Bra023518 (APG6, AtCLPB3, CLPB3, CLPB-P)


Aliases : APG6, AtCLPB3, CLPB3, CLPB-P

Description : organellar chaperone *(Clp-p/Clp-m)


Gene families : OG0006808 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra023518
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_3


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004252 serine-type endopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006465 signal peptide processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006720 isoprenoid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006721 terpenoid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008299 isoprenoid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016114 terpenoid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016459 myosin complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016485 protein processing IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016849 phosphorus-oxygen lyase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051604 protein maturation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR041546 ClpA/ClpB_AAA_lid 414 516
IPR003959 ATPase_AAA_core 672 839
IPR004176 Clp_R_dom 91 140
IPR004176 Clp_R_dom 166 217
IPR003959 ATPase_AAA_core 275 407
IPR019489 Clp_ATPase_C 846 924
No external refs found!