Bra023413 (ATP5)

Aliases : ATP5

Description : subunit delta *(OSCP) of ATP synthase peripheral MF1 subcomplex

Gene families : OG0007172 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra023413
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_152

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005261	monoatomic cation channel activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006164	purine nucleotide biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006754	ATP biosynthetic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009142	nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009152	purine ribonucleotide biosynthetic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	None	Extended
MF	GO:0015252	proton channel activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015986	proton motive force-driven ATP synthesis	IEA	Interproscan
MF	GO:0016874	ligase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046034	ATP metabolic process	None	Extended
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEA	Interproscan
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072522	purine-containing compound biosynthetic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint signaling	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0000077	DNA damage checkpoint signaling	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005743	mitochondrial inner membrane	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006848	pyruvate transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006850	mitochondrial pyruvate transmembrane transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009056	catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009057	macromolecule catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0010564	regulation of cell cycle process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0010948	negative regulation of cell cycle process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015711	organic anion transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015718	monocarboxylic acid transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015849	organic acid transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016192	vesicle-mediated transport	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0019866	organelle inner membrane	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0030896	checkpoint clamp complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0031570	DNA integrity checkpoint signaling	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0031966	mitochondrial membrane	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042770	signal transduction in response to DNA damage	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0045786	negative regulation of cell cycle	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046942	carboxylic acid transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0048193	Golgi vesicle transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0048519	negative regulation of biological process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0048523	negative regulation of cellular process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051726	regulation of cell cycle	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0098798	mitochondrial protein-containing complex	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901475	pyruvate transmembrane transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901575	organic substance catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901987	regulation of cell cycle phase transition	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901988	negative regulation of cell cycle phase transition	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1903825	organic acid transmembrane transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000711	ATPase_OSCP/dsu	62	230

External Links

No external refs found!

Bra023413 (ATP5)

Expression Profile

Co-expression Networks

Functional Annotation