Aliases : FLA16
Description : Fasciclin-type arabinogalactan protein
Gene families : OG0000625 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000625_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa (Bra) PCC: Bra023035 | |
Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_175 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Spov3_chr2.03979 | FLA17 | Fasciclin-type arabinogalactan protein | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0000439 | transcription factor TFIIH core complex | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0003824 | catalytic activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004489 | methylenetetrahydrofolate reductase (NAD(P)H) activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004743 | pyruvate kinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006082 | organic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006289 | nucleotide-excision repair | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006520 | amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006555 | methionine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0007010 | cytoskeleton organization | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0008152 | metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0009072 | aromatic amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016787 | hydrolase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0030955 | potassium ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0031420 | alkali metal ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0043436 | oxoacid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0044238 | primary metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0044281 | small molecule metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0071704 | organic substance metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | Brassica rapa GO terms from Neighborhoods |
No external refs found! |