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Bra022552


Description : pectin methylesterase


Gene families : OG0004440 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004440_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra022552
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Bra029170 No alias pectin methylesterase. EC_3.1 hydrolase acting on ester bond 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004576 oligosaccharyl transferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007034 vacuolar transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0009055 electron transfer activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016843 amine-lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016844 strictosidine synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030570 pectate lyase activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 2 168
No external refs found!