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  5. Bra022363

Bra022363


Description : not classified


Gene families : OG0000623 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000623_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra022363
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Bra003513 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra020001 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra031285 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR046848 E_motif 580 636
IPR002885 Pentatricopeptide_rpt 55 78
IPR002885 Pentatricopeptide_rpt 197 216
IPR002885 Pentatricopeptide_rpt 163 184
IPR002885 Pentatricopeptide_rpt 330 356
IPR002885 Pentatricopeptide_rpt 299 318
IPR002885 Pentatricopeptide_rpt 26 54
IPR002885 Pentatricopeptide_rpt 532 555
IPR002885 Pentatricopeptide_rpt 226 256
IPR002885 Pentatricopeptide_rpt 458 504
IPR002885 Pentatricopeptide_rpt 85 133
No external refs found!