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  5. Bra021937

Bra021937 (JMJ15, MEE27, PKDM7C)


Aliases : JMJ15, MEE27, PKDM7C

Description : histone demethylase *(PKDM7)


Gene families : OG0015452 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra021937
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_168


Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004089 carbonate dehydratase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006351 DNA-templated transcription IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008483 transaminase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016835 carbon-oxygen lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016836 hydro-lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030170 pyridoxal phosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030599 pectinesterase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0035556 intracellular signal transduction IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042545 cell wall modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0052689 carboxylic ester hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0070279 vitamin B6 binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071554 cell wall organization or biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071555 cell wall organization IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004198 Znf_C5HC2 474 527
IPR003347 JmjC_dom 265 370
IPR003888 FYrich_N 629 677
IPR003889 FYrich_C 684 765
IPR003349 JmjN 47 80
No external refs found!