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  5. Bra021720

Bra021720 (EMA1, SAD2, URM9, GIR1)


Aliases : EMA1, SAD2, URM9, GIR1

Description : assembly factor (SAD2/EMA) of RNA-induced silencing complex (RISC) assembly


Gene families : OG0006174 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra021720
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_37


Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
MF GO:0031267 small GTPase binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004674 protein serine/threonine kinase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005759 mitochondrial matrix IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Brassica rapa GO terms from Neighborhoods
MF GO:0034062 5'-3' RNA polymerase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Brassica rapa GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097747 RNA polymerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 26 99
No external refs found!