1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Bra021550

Bra021550 (CREF3)


Aliases : CREF3

Description : RNA editing factor *(CREF3)


Gene families : OG0025967 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra021550
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_130


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003747 translation release factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006415 translational termination IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008079 translation termination factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008173 RNA methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022411 cellular component disassembly IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032984 protein-containing complex disassembly IEP Brassica rapa GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046434 organophosphate catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051287 NAD binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0052646 alditol phosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901136 carbohydrate derivative catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR032867 DYW_dom 337 429
IPR002885 Pentatricopeptide_rpt 196 219
IPR046848 E_motif 238 300
IPR002885 Pentatricopeptide_rpt 19 67
IPR002885 Pentatricopeptide_rpt 121 167
No external refs found!