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  5. Bra002139

Bra002139 (GDH1)


Aliases : GDH1

Description : EC_1.4 oxidoreductase acting on CH-NH2 group of donor. glutamate dehydrogenase


Gene families : OG0002872 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002872_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra002139
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_178


Type GO Term Name Evidence Source
BP GO:0006520 amino acid metabolic process IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002376 immune system process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003743 translation initiation factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004497 monooxygenase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004827 proline-tRNA ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005506 iron ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006413 translational initiation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006418 tRNA aminoacylation for protein translation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006433 prolyl-tRNA aminoacylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006820 monoatomic anion transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006952 defense response IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006955 immune response IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009605 response to external stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009607 response to biotic stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0020037 heme binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0035145 exon-exon junction complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043038 amino acid activation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043039 tRNA aminoacylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043207 response to external biotic stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045087 innate immune response IEP Brassica rapa GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046906 tetrapyrrole binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051707 response to other organism IEP Brassica rapa GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0098542 defense response to other organism IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006096 Glu/Leu/Phe/Val/Trp_DH_C 176 408
IPR006097 Glu/Leu/Phe/Val/Trp_DH_dimer 33 159
No external refs found!