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  5. Bra021403

Bra021403


Description : EC_3.1 hydrolase acting on ester bond. pectin methylesterase


Gene families : OG0011066 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra021403
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_8


Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002376 immune system process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003700 DNA-binding transcription factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004506 squalene monooxygenase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006020 inositol metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006073 obsolete cellular glucan metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006955 immune response IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008061 chitin binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008194 UDP-glycosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009607 response to biotic stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0009916 alternative oxidase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019310 inositol catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019751 polyol metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030170 pyridoxal phosphate binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031323 regulation of cellular metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043207 response to external biotic stimulus IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043565 sequence-specific DNA binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045087 innate immune response IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046164 alcohol catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046174 polyol catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046527 glucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Brassica rapa GO terms from Neighborhoods
MF GO:0050113 inositol oxygenase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0050660 flavin adenine dinucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051707 response to other organism IEP Brassica rapa GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0070279 vitamin B6 binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0098542 defense response to other organism IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140110 transcription regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901616 organic hydroxy compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 35 178
IPR000070 Pectinesterase_cat 248 546
No external refs found!