Bra020905 (CPL1, ATCPL1, FRY2, SHI4, RCF2)


Aliases : CPL1, ATCPL1, FRY2, SHI4, RCF2

Description : group-I RNA polymerase-II phosphatase. phosphatase component *(CPL) of chromatin silencing regulator complex. subcluster CPL phosphatase


Gene families : OG0001598 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001598_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra020905
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_226


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005984 disaccharide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005991 trehalose metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005992 trehalose biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008037 cell recognition IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008134 transcription factor binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009311 oligosaccharide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009312 oligosaccharide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016051 carbohydrate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017025 TBP-class protein binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046351 disaccharide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048544 recognition of pollen IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051087 protein-folding chaperone binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140296 general transcription initiation factor binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004274 FCP1_dom 264 376
IPR014720 dsRBD_dom 715 750
No external refs found!