Bra020703 (ATGLR1.3, GLR1.3)

Aliases : ATGLR1.3, GLR1.3

Description : ligand-gated cation channel *(GLR)

Gene families : OG0002079 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002079_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra020703
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_100

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004601	peroxidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004857	enzyme inhibitor activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006020	inositol metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006066	alcohol metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006950	response to stress	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006979	response to oxidative stress	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009250	glucan biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009719	response to endogenous stimulus	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009725	response to hormone	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009733	response to auxin	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0010033	response to organic substance	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016209	antioxidant activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016491	oxidoreductase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016759	cellulose synthase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019310	inositol catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019751	polyol metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0020037	heme binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0030234	enzyme regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0030243	cellulose metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0030244	cellulose biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042221	response to chemical	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044042	glucan metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044282	small molecule catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046164	alcohol catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046174	polyol catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0046906	tetrapyrrole binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0050113	inositol oxygenase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0050896	response to stimulus	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051273	beta-glucan metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140678	molecular function inhibitor activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901616	organic hydroxy compound catabolic process	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001320	Iontro_rcpt_C	1523	1550
IPR001320	Iontro_rcpt_C	764	791
IPR001638	Solute-binding_3/MltF_N	467	763
IPR001828	ANF_lig-bd_rcpt	846	1139
IPR001828	ANF_lig-bd_rcpt	65	395
IPR001638	Solute-binding_3/MltF_N	1261	1522

External Links

No external refs found!

Bra020703 (ATGLR1.3, GLR1.3)

Expression Profile

Co-expression Networks

Functional Annotation