Aliases : NSE1, emb1379
Description : E3 ubiquitin ligase component *(NSE1) of homologous recombination repair Smc5-Smc6 complex
Gene families : OG0007009 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa (Bra) PCC: Bra020150 | |
Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_232 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006281 | DNA repair | IEA | Interproscan |
CC | GO:0030915 | Smc5-Smc6 complex | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003690 | double-stranded DNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0005839 | proteasome core complex | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006298 | mismatch repair | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006508 | proteolysis | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0009056 | catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0009057 | macromolecule catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0019538 | protein metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0030983 | mismatched DNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0140535 | intracellular protein-containing complex | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:1901575 | organic substance catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR011513 | Nse1 | 9 | 183 |
No external refs found! |