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Aliases : HRS1, AtNIGT1, NIGT1.4
Description : transcriptional repressor *(NIGT). GARP subgroup HHO transcription factor
Gene families : OG0002152 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002152_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra019824 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_78 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Lsat_1_v5_gn_4_20080.1 | HRS1, AtNIGT1, NIGT1.4 | GARP subgroup HHO transcription factor. transcriptional... | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003824 | catalytic activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003993 | acid phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004180 | carboxypeptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004427 | inorganic diphosphate phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004518 | nuclease activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004519 | endonuclease activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004540 | RNA nuclease activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005737 | cytoplasm | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006308 | DNA catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006534 | cysteine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008233 | peptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008238 | exopeptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009092 | homoserine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010167 | response to nitrate | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015074 | DNA integration | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015706 | nitrate transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015858 | nucleoside transport | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016787 | hydrolase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016791 | phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016849 | phosphorus-oxygen lyase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0017171 | serine hydrolase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019346 | transsulfuration | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0033897 | ribonuclease T2 activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0050667 | homocysteine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0098661 | inorganic anion transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901642 | nucleoside transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901698 | response to nitrogen compound | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901700 | response to oxygen-containing compound | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1902025 | nitrate import | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1902074 | response to salt | IEP | Brassica rapa GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |