Bra019317 (CRK11, AT-RLK3)

Aliases : CRK11, AT-RLK3

Description : EC_2.7 transferase transferring phosphorus-containing group. DUF26 protein kinase

Gene families : OG0000094 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000094_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra019317
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_261

Target	Alias	Description	ECC score	Gene Family Method
Bra013678	CRK10, RLK4	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra013679	CRK16	EC_2.7 transferase transferring phosphorus-containing group	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra013684	CRK24	DUF26 protein kinase. EC_2.7 transferase transferring...	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra019323	CRK7	EC_2.7 transferase transferring phosphorus-containing group	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra023844	CRK10, RLK4	DUF26 protein kinase. EC_2.7 transferase transferring...	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra038935	CRK10, RLK4	DUF26 protein kinase. EC_2.7 transferase transferring...	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra040999	CRK10, RLK4	not classified	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004601	peroxidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005509	calcium ion binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006950	response to stress	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006952	defense response	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006979	response to oxidative stress	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009605	response to external stimulus	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009607	response to biotic stimulus	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009617	response to bacterium	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009620	response to fungus	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016209	antioxidant activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016567	protein ubiquitination	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016755	aminoacyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0020037	heme binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0030247	polysaccharide binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0032446	protein modification by small protein conjugation	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042742	defense response to bacterium	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043207	response to external biotic stimulus	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0046906	tetrapyrrole binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0050832	defense response to fungus	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0050896	response to stimulus	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051707	response to other organism	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0098542	defense response to other organism	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140359	ABC-type transporter activity	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002902	GNK2	156	247
IPR002902	GNK2	27	126
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	349	617
IPR000719	Prot_kinase_dom	673	850

External Links

No external refs found!

Bra019317 (CRK11, AT-RLK3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation