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  5. Bra018948

Bra018948 (ATHB15, CNA, ICU4, ATHB-15)


Aliases : ATHB15, CNA, ICU4, ATHB-15

Description : HD-ZIP III-type transcription factor


Gene families : OG0002165 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002165_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra018948
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_1_37081.1 ATHB15, CNA,... HD-ZIP III-type transcription factor 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005507 copper ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008017 microtubule binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008194 UDP-glycosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009250 glucan biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015631 tubulin binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016020 membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016051 carbohydrate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016758 hexosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016759 cellulose synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030243 cellulose metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030244 cellulose biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035251 UDP-glucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044042 glucan metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046527 glucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051273 beta-glucan metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051274 beta-glucan biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 161 369
IPR001356 Homeobox_dom 17 75
IPR013978 MEKHLA 695 837
No external refs found!