Aliases : FRG2, CHR28
Description : chromatin remodeling factor *(Ris1)
Gene families : OG0001129 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001129_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa (Bra) PCC: Bra018847 | |
Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_210 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0000491 | small nucleolar ribonucleoprotein complex assembly | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0000492 | box C/D snoRNP assembly | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0003723 | RNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0003724 | RNA helicase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004743 | pyruvate kinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0005681 | spliceosomal complex | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006401 | RNA catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006402 | mRNA catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0008186 | ATP-dependent activity, acting on RNA | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0009056 | catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0009966 | regulation of signal transduction | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0010629 | negative regulation of gene expression | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0010646 | regulation of cell communication | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0016071 | mRNA metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0019439 | aromatic compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0022618 | protein-RNA complex assembly | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0023051 | regulation of signaling | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0030955 | potassium ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0031072 | heat shock protein binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0031420 | alkali metal ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0046700 | heterocycle catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0048583 | regulation of response to stimulus | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0070403 | NAD+ binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0071826 | protein-RNA complex organization | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:1901575 | organic substance catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
No external refs found! |