Bra018570 (IMPA-4)

Aliases : IMPA-4

Description : nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha)

Gene families : OG0012951 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra018570
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_198

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006606	protein import into nucleus	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034504	protein localization to nucleus	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051170	import into nucleus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
MF	GO:0061608	nuclear import signal receptor activity	IEA	Interproscan
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
MF	GO:0140104	molecular carrier activity	None	Extended
MF	GO:0140142	nucleocytoplasmic carrier activity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004222	metalloendopeptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004392	heme oxygenase (decyclizing) activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006788	heme oxidation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006811	monoatomic ion transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0007034	vacuolar transport	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008173	RNA methyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016712	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016740	transferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042168	heme metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042440	pigment metabolic process	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR032413	Arm_3	465	513
IPR000225	Armadillo	283	321
IPR000225	Armadillo	411	448
IPR000225	Armadillo	114	154
IPR000225	Armadillo	198	239
IPR000225	Armadillo	368	406
IPR000225	Armadillo	252	279
IPR000225	Armadillo	157	195
IPR000225	Armadillo	325	365
IPR002652	Importin-a_IBB	12	103

External Links

No external refs found!