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  5. Bra018379

Bra018379 (TUB7, TBB7)


Aliases : TUB7, TBB7

Description : beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer


Gene families : OG0000145 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra018379
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_236

Target Alias Description ECC score Gene Family Method Actions
Bra039987 TUB7, TBB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_8_72280.1 TUB3 beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_9_25361.1 TUB3 beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_9_33260.1 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.00243 TUB3 beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01202 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000271 polysaccharide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004427 inorganic diphosphate phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004478 methionine adenosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005875 microtubule associated complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007010 cytoskeleton organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007051 spindle organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008194 UDP-glycosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009250 glucan biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0009678 diphosphate hydrolysis-driven proton transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016051 carbohydrate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016758 hexosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016759 cellulose synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022402 cell cycle process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022607 cellular component assembly IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030126 COPI vesicle coat IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030243 cellulose metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030244 cellulose biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035251 UDP-glucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044042 glucan metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044272 sulfur compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046500 S-adenosylmethionine metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046527 glucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051225 spindle assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051273 beta-glucan metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051274 beta-glucan biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Brassica rapa GO terms from Neighborhoods
CC GO:0070652 HAUS complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070925 organelle assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Brassica rapa GO terms from Neighborhoods
BP GO:0140694 non-membrane-bounded organelle assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 3 211
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
No external refs found!