Bra017260 (CASP1)


Aliases : CASP1

Description : lignin polymerization scaffold protein *(CASP)


Gene families : OG0002734 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002734_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra017260
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_56


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005047 signal recognition particle binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005092 GDP-dissociation inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005785 signal recognition particle receptor complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006605 protein targeting IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006612 protein targeting to membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006613 cotranslational protein targeting to membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007264 small GTPase mediated signal transduction IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007265 Ras protein signal transduction IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007266 Rho protein signal transduction IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008194 UDP-glycosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043021 ribonucleoprotein complex binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045047 protein targeting to ER IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048364 root development IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048367 shoot system development IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048731 system development IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051668 localization within membrane IEP Brassica rapa GO terms from Neighborhoods
MF GO:0052689 carboxylic ester hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070972 protein localization to endoplasmic reticulum IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072657 protein localization to membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090150 establishment of protein localization to membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Brassica rapa GO terms from Neighborhoods
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006702 CASP_dom 65 165
No external refs found!