1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Bra017201

Bra017201


Description : plastidial ribonucleoprotein *(CP29)


Gene families : OG0000616 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000616_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra017201
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Bra003136 No alias plastidial ribonucleoprotein *(CP29) 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra023108 No alias plastidial ribonucleoprotein *(CP29) 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004096 catalase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004176 ATP-dependent peptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004655 porphobilinogen synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005347 ATP transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005471 ATP:ADP antiporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006520 amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006766 vitamin metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006767 water-soluble vitamin metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006771 riboflavin metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006862 nucleotide transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008483 transaminase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008514 organic anion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009110 vitamin biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009231 riboflavin biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015215 nucleotide transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015217 ADP transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015748 organophosphate ester transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015931 nucleobase-containing compound transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016835 carbon-oxygen lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016836 hydro-lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016887 ATP hydrolysis activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033013 tetrapyrrole metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042726 flavin-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042727 flavin-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000504 RRM_dom 205 275
IPR000504 RRM_dom 96 166
No external refs found!