Bra001704 (EMB1865)


Aliases : EMB1865

Description : not classified


Gene families : OG0004080 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004080_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra001704
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_197


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003747 translation release factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004525 ribonuclease III activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004559 alpha-mannosidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004602 glutathione peroxidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005509 calcium ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006415 translational termination IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006766 vitamin metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006767 water-soluble vitamin metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006771 riboflavin metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008079 translation termination factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009110 vitamin biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009231 riboflavin biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0009521 photosystem IEP Brassica rapa GO terms from Neighborhoods
CC GO:0009523 photosystem II IEP Brassica rapa GO terms from Neighborhoods
CC GO:0009654 photosystem II oxygen evolving complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015923 mannosidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015979 photosynthesis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Brassica rapa GO terms from Neighborhoods
CC GO:0019898 extrinsic component of membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022411 cellular component disassembly IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030976 thiamine pyrophosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032984 protein-containing complex disassembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042726 flavin-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042727 flavin-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046434 organophosphate catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0050997 quaternary ammonium group binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0052646 alditol phosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901681 sulfur compound binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:1990204 oxidoreductase complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 434 518
IPR001890 RNA-binding_CRM 236 317
IPR001890 RNA-binding_CRM 646 728
No external refs found!