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  5. Bra001678

Bra001678 (CNGC20, ATCNGC20, CNBT1)


Aliases : CNGC20, ATCNGC20, CNBT1

Description : cyclic nucleotide-gated cation channel *(CNGC)


Gene families : OG0000890 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000890_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra001678
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_118


Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004674 protein serine/threonine kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008417 fucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030247 polysaccharide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030599 pectinesterase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042545 cell wall modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042546 cell wall biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0052689 carboxylic ester hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071554 cell wall organization or biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071555 cell wall organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 121 454
No external refs found!