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  5. Bra001642

Bra001642 (PGF5)


Aliases : PGF5

Description : EC_3.2 glycosylase


Gene families : OG0010720 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra001642
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_260


Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004834 tryptophan synthase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005743 mitochondrial inner membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006022 aminoglycan metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006026 aminoglycan catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006030 chitin metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006032 chitin catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006040 amino sugar metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006568 tryptophan metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006576 biogenic amine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006586 indolalkylamine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006848 pyruvate transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0010333 terpene synthase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015711 organic anion transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015718 monocarboxylic acid transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015849 organic acid transport IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016020 membrane IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016758 hexosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016759 cellulose synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016835 carbon-oxygen lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016860 intramolecular oxidoreductase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016998 cell wall macromolecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0019866 organelle inner membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030243 cellulose metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030244 cellulose biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Brassica rapa GO terms from Neighborhoods
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Brassica rapa GO terms from Neighborhoods
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Brassica rapa GO terms from Neighborhoods
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042430 indole-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044036 cell wall macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046348 amino sugar catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046942 carboxylic acid transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901071 glucosamine-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901072 glucosamine-containing compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901136 carbohydrate derivative catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901475 pyruvate transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:1903825 organic acid transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:1905039 carboxylic acid transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 129 411
No external refs found!